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1

Monitoring GFP-operon fusion protein expression during high cell density cultivation of Escherichia coli using an on-line optical sensor

Matthew P. DeLisa, Jincai Li, Govind Rao, William A. Weigand, William E. Bentley

Journal:

Biotechnology and Bioengineering

Year:

1999

Language:

english

File:

PDF, 321 KB

english, 1999

2

Framework for online optimization of recombinant protein expression in high-cell-density Escherichia coli cultures using GFP-fusion monitoring

Hee Jeong Chae, Matthew P. Delisa, Hyung Joon Cha, William A. Weigand, Govind Rao, William E. Bentley

Journal:

Biotechnology and Bioengineering

Year:

2000

Language:

english

File:

PDF, 187 KB

english, 2000

3

Evanescent Wave Long-Period Fiber Bragg Grating as an Immobilized Antibody Biosensor

DeLisa, Matthew P., Zhang, Zheng, Shiloach, Mira, Pilevar, Saeed, Davis, Christopher C., Sirkis, James S., Bentley, William E.

Journal:

Analytical Chemistry

Year:

2000

Language:

english

File:

PDF, 163 KB

english, 2000

4

Expanding the glycoengineering toolbox: the rise of bacterial N-linked protein glycosylation

Baker, Jenny L., Çelik, Eda, DeLisa, Matthew P.

Journal:

Trends in Biotechnology

Year:

2013

Language:

english

File:

PDF, 723 KB

english, 2013

5

Golgi-on-a-Chip for the Cell-Free Bio-Nanomanufacturing of Protein Therapeutics

Daniel, Susan, Aquino, Alicia, DeLisa, Matthew, Jaroentomeechai, Thapakorn, Liu, Han-Yuan, Manzer, Zachary, Pinnock, Ferra, Singh, Rohit R.

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 43 KB

english, 2019

6

Substitute sweeteners: diverse bacterial oligosaccharyltransferases with unique N-glycosylation site preferences

Ollis, Anne A., Chai, Yi, Natarajan, Aravind, Perregaux, Emily, Jaroentomeechai, Thapakorn, Guarino, Cassandra, Smith, Jessica, Zhang, Sheng, DeLisa, Matthew P.

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 1.89 MB

english, 2015

7

Cell-Free Synthetic Glycobiology: Designing and Engineering Glycomolecules Outside of Living Cells

Jaroentomeechai, Thapakorn, Taw, May N., Li, Mingji, Aquino, Alicia, Agashe, Ninad, Chung, Sean, Jewett, Michael C., DeLisa, Matthew P.

Journal:

Frontiers in Chemistry

Year:

2020

File:

PDF, 1.70 MB

2020

8

Synthetic metabolic pipelines

DeLisa, Matthew P, Conrado, Robert J

Journal:

Nature Biotechnology

Year:

2009

Language:

english

File:

PDF, 220 KB

english, 2009

9

Genetic selection for protein solubility enabled by the folding quality control feature of the twin-arginine translocation pathway

Adam C. Fisher, Woojin Kim, Matthew P. Delisa

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 618 KB

english, 2006

10

Delivery of Foreign Antigens by Engineered Outer Membrane Vesicle Vaccines

David J. Chen, Nikolaus Osterrieder, Stephan M. Metzger, Elizabeth Buckled, Anne M. Dood, Matthew P. DeLisa, David Putnam and Robert Langer

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.23 MB

english, 2010

11

A cell-free biosynthesis platform for modular construction of protein glycosylation pathways

Kightlinger, Weston, Duncker, Katherine E., Ramesh, Ashvita, Thames, Ariel H., Natarajan, Aravind, Stark, Jessica C., Yang, Allen, Lin, Liang, Mrksich, Milan, DeLisa, Matthew P., Jewett, Michael C.

Journal:

Nature Communications

Year:

2019

File:

PDF, 2.05 MB

2019

12

Directed Evolution of Mycobacterium tuberculosis β-Lactamase Reveals Gatekeeper Residue That Regulates Antibiotic Resistance and Catalytic Efficiency

Feiler, Christian, Fisher, Adam C., Boock, Jason T., Marrichi, Matthew J., Wright, Lori, Schmidpeter, Philipp A. M., Blankenfeldt, Wulf, Pavelka, Martin, DeLisa, Matthew P., Mayer, Claudine

Journal:

Year:

2013

Language:

english

File:

PDF, 3.16 MB

english, 2013

13

Protein translocation through a tunnel induces changes in folding kinetics: A lattice model study

Lydia M. Contreras Martínez, Francisco J. Martínez-Veracoechea, Prabhas Pohkarel, Abraham D. Stroock, Fernando A. Escobedo, Matthew P. DeLisa

Journal:

Biotechnology and Bioengineering

Year:

2006

Language:

english

File:

PDF, 680 KB

english, 2006

14

Engineering the spatial organization of metabolic enzymes: mimicking nature's synergy

Robert J Conrado, Jeffrey D Varner, Matthew P DeLisa

Journal:

Current Opinion in Biotechnology

Year:

2008

Language:

english

File:

PDF, 598 KB

english, 2008

15

Engineered Bacterial Outer Membrane Vesicles with Enhanced Functionality

Jae-Young Kim, Anne M. Doody, David J. Chen, Gina H. Cremona, Michael L. Shuler, David Putnam, Matthew P. DeLisa

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.63 MB

english, 2008

16

An Essential Role for the DnaK Molecular Chaperone in Stabilizing Over-expressed Substrate Proteins of the Bacterial Twin-arginine Translocation Pathway

Ritsdeliz Pérez-Rodríguez, Adam C. Fisher, Jason D. Perlmutter, Matthew G. Hicks, Angélique Chanal, Claire-Lise Santini, Long-Fei Wu, Tracy Palmer, Matthew P. DeLisa

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.05 MB

english, 2007

17

Computational affinity maturation of camelid single-domain intrabodies against the nonamyloid component of alpha-synuclein

Mahajan, Sai Pooja, Meksiriporn, Bunyarit, Waraho-Zhmayev, Dujduan, Weyant, Kevin B., Kocer, Ilkay, Butler, David C., Messer, Anne, Escobedo, Fernando A., DeLisa, Matthew P.

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 2.10 MB

english, 2018

18

A rapid protein folding assay for the bacterial periplasm

Thomas J. Mansell, Stephen W. Linderman, Adam C. Fisher, Matthew P. DeLisa

Journal:

Protein Science

Year:

2010

Language:

english

File:

PDF, 425 KB

english, 2010

19

First International Conference on BiomolecularEngineering (ICBE)

Matthew DeLisa, Jason Haugh

Journal:

Biotechnology Progress

Year:

2008

Language:

english

File:

PDF, 11 KB

english, 2008

20

Kinetics and Reaction Coordinates of the Reassembly of Protein Fragments Via Forward Flux Sampling

Borrero, Ernesto E., Contreras Martínez, Lydia M., DeLisa, Matthew P., Escobedo, Fernando A.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 1.53 MB

english, 2010

21

Pathogen-like particles: biomimetic vaccine carriers engineered at the nanoscale

Rosenthal, Joseph A., Chen, Linxiao, Baker, Jenny L., Putnam, David, DeLisa, Matthew P.

Journal:

Current Opinion in Biotechnology

Year:

2014

Language:

english

File:

PDF, 839 KB

english, 2014

22

A Water-Soluble DSBB Variant that Catalyzes Disulfide-Bond Formation In Vivo

Mizrachi, Dario, DeLisa, Matthew

Journal:

Biophysical Journal

Year:

2018

File:

PDF, 41 KB

2018

23

Engineering a new generation of carbohydrate-based vaccines

Weyant, Kevin B, Mills, Dominic C, DeLisa, Matthew P

Journal:

Current Opinion in Chemical Engineering

Year:

2018

Language:

english

File:

PDF, 749 KB

english, 2018

24

The ribosomal exit tunnel as a target for optimizing protein expression in Escherichia coli

Lydia M. Contreras-Martinez, Jason T. Boock, Jan S. Kostecki, Prof. Matthew P. DeLisa

Journal:

Biotechnology Journal

Year:

2012

Language:

english

File:

PDF, 503 KB

english, 2012

25

Engineered genetic selection links in vivo protein folding and stability with asparagine-linked glycosylation

Mansell, Thomas J., Guarino, Cassandra, DeLisa, Matthew P.

Journal:

Biotechnology Journal

Year:

2013

Language:

english

File:

PDF, 460 KB

english, 2013

26

Repurposing a Bacterial Quality Control Mechanism to Enhance Enzyme Production in Living Cells

Boock, Jason T., King, Brian C., Taw, May N., Conrado, Robert J., Siu, Ka-Hei, Stark, Jessica C., Walker, Larry P., Gibson, Donna M., DeLisa, Matthew P.

Journal:

Journal of Molecular Biology

Year:

2015

Language:

english

File:

PDF, 1.18 MB

english, 2015

27

A Molecularly Complete Planar Bacterial Outer Membrane Platform

Hsia, Chih-Yun, Chen, Linxiao, Singh, Rohit R., DeLisa, Matthew P., Daniel, Susan

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.21 MB

english, 2016

28

Metabolic engineering of glycoprotein biosynthesis in bacteria

Natarajan, Aravind, Jaroentomeechai, Thapakorn, Li, Mingji, Glasscock, Cameron J., DeLisa, Matthew P.

Journal:

Emerging Topics in Life Sciences

Year:

2018

Language:

english

File:

PDF, 746 KB

english, 2018

29

Structure-Based Prediction of Polypeptide Substrate Specificities of Glycosyltransferases

Srinivasan, Yashes, Pooja Mahajan, Sai, Labonte, Jason, DeLisa, Matthew P., Gray, Jeffrey J.

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 45 KB

english, 2019

30

Successful Rational Affinity Maturation of an Alpha-Synuclein Antibody

Pooja Mahajan, Sai, Meksiriporn, Bunyarit, Waraho-Zhmayev, Dujduan, Escobedo, Fernando, Delisa, Matthew P.

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 42 KB

english, 2018

31

Positional Assembly of Enzymes on Bacterial Outer Membrane Vesicles for Cascade Reactions

Park, Miso, Sun, Qing, Liu, Fang, DeLisa, Matthew P., Chen, Wilfred, Hozbor, Daniela Flavia

Journal:

Year:

2014

Language:

english

File:

PDF, 827 KB

english, 2014

32

Engineered Protein Machines: Emergent Tools for Synthetic Biology

Glasscock, Cameron J., Lucks, Julius B., DeLisa, Matthew P.

Journal:

Cell Chemical Biology

Year:

2016

Language:

english

File:

PDF, 1.28 MB

english, 2016

33

Laboratory Evolution of Fast-Folding Green Fluorescent Protein Using Secretory Pathway Quality Control

Fisher, Adam C., DeLisa, Matthew P., Michnick, Stephen W.

Journal:

Year:

2008

Language:

english

File:

PDF, 298 KB

english, 2008

34

High-throughput synthesis and analysis of intact glycoproteins using SAMDI-MS

Techner, José-Marc, Kightlinger, Weston, Lin, Liang, Hershewe, Jasmine, Ramesh, Ashvita, DeLisa, Matthew P., Jewett, Michael C., Mrksich, Milan

Journal:

Analytical Chemistry

Year:

2019

Language:

english

File:

PDF, 1.07 MB

english, 2019

35

Bacterial autoinduction: looking outside the cell for new metabolic engineering targets

Matthew P DeLisa, William E Bentley

Journal:

Microbial Cell Factories

Year:

2002

Language:

english

File:

PDF, 568 KB

english, 2002

36

In Silico Protein Fragmentation Reveals the Importance of Critical Nuclei on Domain Reassembly

Contreras Martínez, Lydia M., Borrero Quintana, Ernesto E., Escobedo, Fernando A., DeLisa, Matthew P.

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 893 KB

english, 2008

37

Human recombinant N-acetylgalactosamine-6-sulfate sulfatase (GALNS) produced in a glycoengineered Escherichia coli strain

Almeciga-DIaz, Carlos J, Pimentel-Vera, Luisa N, Rodriguez-Lopez, Alexander, Espejo-Mojica, Angela, Ramirez, Aura M, Cardona, Carolina, Reyes, Luis H, DeLisa, Matthew P, Sanchez, Oscar F

Journal:

Molecular Genetics and Metabolism

Year:

2017

Language:

english

File:

PDF, 44 KB

english, 2017

38

A single dose and long lasting vaccine against pandemic influenza through the controlled release of a heterospecies tandem M2 sequence embedded within detoxified bacterial outer membrane vesicles

Watkins, Hannah C., Pagan, Catalina L., Childs, Hannah R., Posada, Sara, Chau, Annie, Rios, Jose, Guarino, Cassandra, DeLisa, Matthew P., Whittaker, Gary R., Putnam, David

Journal:

Year:

2017

Language:

english

File:

PDF, 1.07 MB

english, 2017

39

Glyco-recoded Escherichia coli: Recombineering-based genome editing of native polysaccharide biosynthesis gene clusters

Yates, Laura E., Natarajan, Aravind, Li, Mingji, Hale, Margaret, Mills, Dominic C., DeLisa, Matthew P.

Journal:

Metabolic Engineering

Year:

2019

Language:

english

File:

PDF, 42.11 MB

english, 2019

40

Antibody-mediated endocytosis of polysialic acid enables intracellular delivery and cytotoxicity of a glycan-directed antibody-drug conjugate

Cox, Emily C, Thornlow, Dana N, Jones, Michaela A, Fuller, Jordan L, Merritt, Judith H, Paszek, Matthew J, Alabi, Chris A, DeLisa, Matthew P

Journal:

Cancer Research

Year:

2019

Language:

english

File:

PDF, 7.83 MB

english, 2019

41

Induced Fusion and Aggregation of Bacterial Outer Membrane Vesicles: Experimental and Theoretical Analysis

M. D. Gnopo, Yehou, Mirsa, Aditya, Hsu, Hung-Lun, DeLisa, Matthew P., Daniel, Susan, Putnam, David

Journal:

Journal of Colloid and Interface Science

Year:

2020

File:

PDF, 731 KB

2020

42

Stochastic reaction–diffusion simulation of enzyme compartmentalization reveals improved catalytic efficiency for a synthetic metabolic pathway

Robert J. Conrado, Thomas J. Mansell, Jeffrey D. Varner, Matthew P. DeLisa

Journal:

Metabolic Engineering

Year:

2007

Language:

english

File:

PDF, 802 KB

english, 2007

43

Envelope stress is a trigger of CRISPR RNA-mediated DNA silencing in Escherichia coli

Ritsdeliz Perez-Rodriguez, Charles Haitjema, Qingqiu Huang, Ki Hyun Nam, Sarah Bernardis, Ailong Ke, Matthew P. DeLisa

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 955 KB

english, 2011

44

Cas5d Protein Processes Pre-crRNA and Assembles into a Cascade-like Interference Complex in Subtype I-C/Dvulg CRISPR-Cas System

Ki Hyun Nam, Charles Haitjema, Xueqi Liu, Fran Ding, Hongwei Wang, Matthew P. DeLisa, Ailong Ke

Journal:

Year:

2012

Language:

english

File:

PDF, 3.84 MB

english, 2012

45

Pair velocity correlations among swimming Escherichia coli bacteria are determined by force-quadrupole hydrodynamic interactions

Liao, Qian, Subramanian, Ganesh, DeLisa, Matthew P., Koch, Donald L., Wu, Mingming

Journal:

Physics of Fluids

Year:

2007

Language:

english

File:

PDF, 790 KB

english, 2007

46

Effects of variable domain orientation on antiâHER2 singleâchain variable fragment antibody expressed in the Escherichia coli cytoplasm

KoÃ§er, Ä°lkay, Cox, Emily C., DeLisa, Matthew P., Ãelik, Eda

Journal:

Biotechnology Progress

Year:

2020

File:

PDF, 1.28 MB

2020

47

Exploration of twin-arginine translocation for expression and purification of correctly folded proteins in Escherichia coli

Adam C. Fisher, Jae-Young Kim, Ritsdeliz Perez-Rodriguez, Danielle Tullman-Ercek, Wallace R. Fish, Lee A. Henderson, Matthew P. DeLisa

Journal:

Microbial Biotechnology

Year:

2008

Language:

english

File:

PDF, 407 KB

english, 2008

48

Glycans-by-design: Engineering bacteria for the biosynthesis of complex glycans and glycoconjugates

Merritt, Judith H., Ollis, Anne A., Fisher, Adam C., DeLisa, Matthew P.

Journal:

Biotechnology and Bioengineering

Year:

2013

Language:

english

File:

PDF, 4.78 MB

english, 2013

49

Site-Specific Labeling of Surface Proteins on Living Cells Using Genetically Encoded Peptides that Bind Fluorescent Nanoparticle Probes

Rocco, Mark A., Kim, Jae-Young, Burns, Andrew, Kostecki, Jan, Doody, Anne, Wiesner, Ulrich, DeLisa, Matthew P.

Journal:

Bioconjugate Chemistry

Year:

2009

Language:

english

File:

PDF, 2.90 MB

english, 2009

50

Glycoarrays with engineered phages displaying structurally diverse oligosaccharides enable high-throughput detection of glycan-protein interactions

Çelik, Eda, Ollis, Anne A., Lasanajak, Yi, Fisher, Adam C., Gür, Göksu, Smith, David F., DeLisa, Matthew P.

Journal:

Biotechnology Journal

Year:

2015

Language:

english

File:

PDF, 772 KB

english, 2015

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